Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905192.1_cds_XP_016455410.1_49336
CDS Infomation

[gene=LOC107779477] [db_xref=GeneID:107779477] [protein=uncharacterized protein LOC107779477 isoform X2] [protein_id=XP_016455410.1] [location=complement(join(101821..102123,102292..102420,102589..102675,102754..102813,102912..103011,103662..104065,104210..104608,105216..105287,105374..105427))] [gbkey=CDS]
Sequence

ATGGAGGAAGAAAAGCTTAGTGAATTCTGCAAATCTTCATACCATCTTGACTTGAACTAT
ACAGAGGAGAAGAAAAGACAATTACCTGGCGGCAGACAACATGATTCTTCTAAGGAAGAA
GTTAATCGTGCTCATGAAGATCTGATTAGAGAAATTTCTCTTCTGGAGCTGGATATTTTG
TGTTTGGAGAAGCATCTCCTTTCAATGTATCGAAAAACATTTGCTAAATGCTTAAAATCA
CTGTCAAAAACTAATTCAACTCCCAACGAAAGGAGACTTTCAGAAATCAAAGAGCAAAAT
GGCAAGCCAAAGGAAAATCAAATGACTAATACTAGTCCTATTTTACCACCTTTGGATAAT
CCAATCAAAGAATGTGATGACACACAAAAACTAGTTGATTCTACCATTTTGAGATGCCAT
TCTTCCCTATCACATGCTGCTTTTTCCTTCAGAGCTTCACCTTCAGTTGCAGCTCTTGTT
GAGGCTGTAGACTCATACCATTCTTTGCCTTTATCAATGCTCGAGCACGCTCAGCTGTCA
ACTTCTAATAGGAGTCTCGCGGAGCATTTTGTTCCCAATTGTTTTAATAATTATCATGGC
TCGCCAAGCCAGCTGTCAGAAGAAATGATCAAGTGCATTTCAGCCATATATTGTCAGCTT
GCTGATCCGCCTTTCTTTGGCCATGATTTAAGTTTGTCTCCCATCTCAGTCTCATCATCA
AAACTGGAATGTTTTCCTCAAGCTCAGGGTGATATCCAGGGACAGCAATGCAGAGAAAAT
TCATTTTCTGGTTCGTCGTTGAACAATCTGTTCCACATTGAAGATTCAAAGGGATTTAGC
AGATGTTTTGTCAGAATGGTTGAGGTGCAAGGGCTGCGTCGAGATAGCCAGAGCTTAAAT
GGTGCAGAGCACATGCTAAAGCAATTTAGGTATCTGGTCTCAAAGTTGGAAGAAGTTGAC
CCTAGGAAAATGAGACATGGAGAGAAACTAGCTTTTTGGATTAATGTCCACAATGCACTA
GTGATGCATGCATTTTTGGTTCATGGGATTCCAAGAAGTAATCTAAAGAGAGCATCTCTA
CTTCTTAAGGCAGCTTACAACATTGGAGGGAATACAGTAAGCGCAGACAGGATTCAAAAT
TCTATACTACGATGCCAGTTGCCTCGTCCTGGTCAGTGGCTTCAATCATTGTTCTTTACT
AAACAAAGATTTAAGGCTGGAGATGCACGAAAGGGATATGCATTAGAGCATCCAGATCCT
CGCCTACGCTTTACTCTCTGCTCAGGAAACCATTCTGATAATGTGCTTCGTCTGTACACA
TCGAAGAGAGTGTTCGAAGAACTAGAAGTGGCTAAAGACGAGTACATTCAGGCAAACATA
AGGGTAAACAAAGAACAAAAACTAGTCCTTCCAAAGAATGTGGAATCTTATATTAAAGAG
ATAAATTTGGGCACATCTGGTTTTTTCGAAATGATGGAGCAAGCATTACCTTCTTATTTG
AGGAAGAAAATTCAGCAGCCCGAGCAACGTAAGTTGTGGAAGAAAATTGATTGGATTCCT
CACAACTTCACTTTCCGCTACCTTATTTCAAGTGAATTGGTTGAGTGA

Peptide Sequence

PEP ID

XP_016455410.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107779477 isoform X2 [Nicotiana tabacum]
Sequence

MEEEKLSEFCKSSYHLDLNYTEEKKRQLPGGRQHDSSKEEVNRAHEDLIREISLLELDIL
CLEKHLLSMYRKTFAKCLKSLSKTNSTPNERRLSEIKEQNGKPKENQMTNTSPILPPLDN
PIKECDDTQKLVDSTILRCHSSLSHAAFSFRASPSVAALVEAVDSYHSLPLSMLEHAQLS
TSNRSLAEHFVPNCFNNYHGSPSQLSEEMIKCISAIYCQLADPPFFGHDLSLSPISVSSS
KLECFPQAQGDIQGQQCRENSFSGSSLNNLFHIEDSKGFSRCFVRMVEVQGLRRDSQSLN
GAEHMLKQFRYLVSKLEEVDPRKMRHGEKLAFWINVHNALVMHAFLVHGIPRSNLKRASL
LLKAAYNIGGNTVSADRIQNSILRCQLPRPGQWLQSLFFTKQRFKAGDARKGYALEHPDP
RLRFTLCSGNHSDNVLRLYTSKRVFEELEVAKDEYIQANIRVNKEQKLVLPKNVESYIKE
INLGTSGFFEMMEQALPSYLRKKIQQPEQRKLWKKIDWIPHNFTFRYLISSELVE

Transcript Sequence

Gene sequence data has not been registered.